--- /dev/null
+# -*- coding: utf-8 -*-
+#Author: Pierre Ratinaud
+#Copyright (c) 2008-2020 Pierre Ratinaud
+#License: GNU/GPL
+
+#------------------------------------
+# import des modules python
+#------------------------------------
+import string
+import os
+import sys
+import tempfile
+from time import sleep
+
+#------------------------------------
+# import des modules wx
+#------------------------------------
+import wx
+
+#------------------------------------
+# import des fichiers du projet
+#------------------------------------
+from chemins import ffr
+from layout import MakeHeader,MakeStudentTable
+from functions import exec_rcode, check_Rresult
+
+
+class StudentDialog(wx.Dialog):
+
+ def __init__(
+ self, parent, ID, title, size=wx.DefaultSize, pos=wx.DefaultPosition,
+ style=wx.DEFAULT_DIALOG_STYLE
+ ):
+ wx.Dialog.__init__(self) # 1
+ self.SetExtraStyle(wx.DIALOG_EX_CONTEXTHELP) # 2
+ self.Create(parent, ID, title) # 3
+ Filename=parent.PATH[0]
+ self.content=parent.table[:]
+ self.HEADER=parent.header[:]
+ fnb={}
+ inb={}
+ cnb={}
+ vide={}
+ #FIXME : assume une premiere ligne contenant les noms de colonnes
+ for line in self.content:
+ i=0
+ for val in line :
+ if val=='':
+ if i in vide:
+ vide[i]+=1
+ else:
+ vide[i]=1
+ else:
+ try:
+ int(val)
+ if i in inb:
+ inb[i]+=1
+ else:
+ inb[i]=1
+ except:
+ try:
+ float(val)
+ if i in fnb:
+ fnb[i]+=1
+ else:
+ fnb[i]=1
+ except:
+ if i in cnb:
+ cnb[i]+=1
+ else:
+ cnb[i]=1
+ i+=1
+ dicttot={}
+ for key,nb in vide.items():
+ dicttot[key]=['vide',nb]
+ print(dicttot)
+ for key,nb in inb.items() :
+ if key in dicttot:
+ dicttot[key]=['int',dicttot[key][1]+nb]
+ else:
+ dicttot[key]=['int',nb]
+ for key,nb in fnb.items():
+ if key in dicttot:
+ dicttot[key]=['float',dicttot[key][1]+nb]
+ else:
+ dicttot[key]=['float',nb]
+ for key,nb in cnb.items():
+ if key in dicttot:
+ dicttot[key]=['char',dicttot[key][1]+nb]
+ else:
+ dicttot[key]=['char',nb]
+ acontent=array(self.content)
+ self.ListGrp=[]
+ lg=[i for i,descr in dicttot.items() if descr[0]=='char']
+ for i in lg:
+ if len(unique(acontent[:,i]))==2:
+ self.ListGrp.append(i)
+ elif ('' in unique(acontent[:,i]).tolist()) and len(unique(acontent[:,i]))==3:
+ self.ListGrp.append(i)
+ li=[i for i,descr in dicttot.items() if descr[0]=='int']
+ lf=[i for i,descr in dicttot.items() if descr[0]=='float']
+ self.ListNum=li+lf
+ print(self.ListGrp, self.ListNum)
+ LABELLIST=[]
+ for i in self.HEADER:
+ if len(i)>60 :
+ LABELLIST.append(i[0:60])
+ else:
+ LABELLIST.append(i)
+ self.LabelListGrp=[]
+ self.LabelListNum=[]
+ for i in self.ListGrp :
+ self.LabelListGrp.append(LABELLIST[i])
+ for i in self.ListNum :
+ self.LabelListNum.append(LABELLIST[i])
+ self.list_box_1 = wx.ListBox(self, -1, choices=self.LabelListGrp, style=wx.LB_MULTIPLE|wx.LB_HSCROLL)
+ self.list_box_2 = wx.ListBox(self, -1, choices=self.LabelListNum, style=wx.LB_MULTIPLE|wx.LB_HSCROLL)
+ self.button_1 = wx.Button(self, wx.ID_OK)
+ self.button_cancel = wx.Button(self, wx.ID_CANCEL)
+ self.__set_properties()
+ self.__do_layout()
+ self.Bind(wx.EVT_LISTBOX, self.Select1, self.list_box_1)
+ # end wxGlade
+ self.TEMPDIR=parent.TEMPDIR
+ self.parent=parent
+ self.Filename=parent.fileforR
+ #--------------FIXME
+ self.num=parent.FreqNum
+ #-------------------------------
+
+ def __set_properties(self):
+ # begin wxGlade: ConfChi2.__set_properties
+ self.SetTitle("Sélection des variables")
+ self.list_box_1.SetSelection(0)
+ self.list_box_2.SetSelection(0)
+ # end wxGlade
+
+ def __do_layout(self):
+ # begin wxGlade: ConfChi2.__do_layout
+ sizer_1 = wx.BoxSizer(wx.VERTICAL)
+ sizer_2 = wx.BoxSizer(wx.VERTICAL)
+ sizer_3 = wx.BoxSizer(wx.HORIZONTAL)
+ sizer_4 = wx.BoxSizer(wx.HORIZONTAL)
+ sizer_3.Add(self.list_box_1, 0, wx.EXPAND, 0)
+ sizer_3.Add(self.list_box_2, 0, wx.EXPAND|wx.ALIGN_CENTER_HORIZONTAL, 0)
+ sizer_2.Add(sizer_3, 1, wx.EXPAND, 0)
+ sizer_4.Add(self.button_cancel, 0, wx.ALL|wx.ALIGN_CENTER_HORIZONTAL, 0)
+ sizer_4.Add(self.button_1, 0, wx.ALL|wx.ALIGN_CENTER_HORIZONTAL, 0)
+ sizer_2.Add(sizer_4, 0, wx.ALIGN_CENTRE_HORIZONTAL, 0)
+ sizer_1.Add(sizer_2, 1, wx.EXPAND, 0)
+ self.SetSizer(sizer_1)
+ sizer_1.Fit(self)
+ self.Layout()
+ # end wxGlade
+
+ def Select1(self, event): # wxGlade: ConfChi2.<event_handler>
+ event.Skip()
+
+ def ShowStudent(self,select1,select2):
+ parent=self.parent
+ self.encode=self.parent.SysEncoding
+ #################################################
+ #max = len(select1)*len(select2)
+ #dlg = wx.ProgressDialog("Traitements",
+ # "Veuillez patienter...",
+ # maximum = max,
+ # parent=self,
+ # style = wx.PD_APP_MODAL
+ # )
+ #dlg.Center()
+ #count = 0
+ ###############################################
+ Graph=True
+ colgrp=[self.ListGrp[i] for i in select1]
+ colnum=[self.ListNum[i] for i in select2]
+ if len(select1)==1:
+ strcolgrp=str(tuple(colgrp)).replace(',','')
+ else:
+ strcolgrp=str(tuple(colgrp))
+ if len(select2)==1:
+ strcolnum=str(tuple(colnum)).replace(',','')
+ else:
+ strcolnum=str(tuple(colnum))
+ txtR=''
+ txtR+="""
+ source('%s')
+ """%self.parent.RscriptsPath['Rfunct']
+ if parent.g_id: rownames='1'
+ else : rownames='NULL'
+ if parent.g_header : header = 'TRUE'
+ else : header = 'FALSE'
+ #txtR+="""
+ #datadm <- ReadData('%s', encoding='%s',header = %s, sep = '%s',quote = '%s', na.strings = '%s',rownames=%s)
+ txtR += """
+ datadm <- read.csv2('%s', encoding='%s',header = %s, sep = '%s',quote = '%s', na.strings = '%s',row.names=%s, dec='.')
+ """%(ffr(self.Filename),parent.encode,header, parent.colsep,parent.txtsep,parent.nastrings,rownames)
+ txtR+="""
+ num<-%i
+ """%self.num
+ txtR+="""
+ tmpdir<-'%s'
+ """%ffr(self.TEMPDIR)
+ txtR+="""
+ out<-matrix(0,0,1)
+ count<-0
+ for (i in c%s) {
+ """%strcolgrp
+ txtR+="""
+ for (j in c%s) {
+ """%strcolnum
+ txtR+="""
+ datadm[,(j+1)]<-as.numeric(datadm[,(j+1)])
+ count<-count+1
+ fileout<-paste('student',num,sep='')
+ fileout<-paste(fileout,'_',sep='')
+ fileout<-paste(fileout,count,sep='')
+ fileout<-paste(fileout,'.jpeg',sep='')
+ fileout<-file.path(tmpdir,fileout)
+ if (Sys.info()["sysname"]=='Darwin') {
+ quartz(file=fileout,type='jpeg')
+ par(cex=1)
+ } else {
+ jpeg(fileout,res=200)
+ par(cex=0.4)
+ }
+ plot(datadm[,(j+1)] ~ datadm[,(i+1)],data=datadm)
+ dev.off()
+ student<-t.test(datadm[,(j+1)] ~ datadm[,(i+1)],data=datadm)
+ pvalue<-student$p.value
+ method<-student$method
+ tvalue<-student$statistic
+ df<-student$parameter
+ grmean<-as.matrix(student$estimate)
+ out<-rbind(out,round(grmean,digits=2))
+ out<-rbind(out,pvalue)
+ out<-rbind(out,method)
+ out<-rbind(out,tvalue)
+ out<-rbind(out,round(df,digits=2))
+ out<-rbind(out,fileout)
+ out<-rbind(out,"**")
+ }
+ }
+ """
+ restmp=tempfile.mktemp(dir=self.TEMPDIR)
+ txtR+="""
+ write.csv2(out,file='%s')
+ """%ffr(restmp)
+ tmpfile=tempfile.mktemp(dir=self.TEMPDIR)
+ tmpscript=open(tmpfile,'w')
+ tmpscript.write(txtR)
+ tmpscript.close()
+ pid = exec_rcode(self.parent.RPath, tmpfile, wait = False)
+ while pid.poll() == None :
+ sleep(0.2)
+ check_Rresult(self.parent, pid)
+ file=open(restmp,'r')
+ res=file.readlines()
+ file.close()
+ resl=[line.replace('\n','').replace('"','').split(';') for line in res]
+ resl.pop(0)
+ i=0
+ student={}
+ listr=[]
+ for line in resl :
+ if i==8 :
+ i=0
+ if i==0 :
+ student['grp1']=line[0].replace('mean in group ','')
+ student['mean1']=float(line[1])
+ if i==1 :
+ student['grp2']=line[0].replace('mean in group ','')
+ student['mean2']=float(line[1])
+ if i==2:
+ student['p.value']=float(line[1])
+ if i==3:
+ student['method']=line[1]
+ if i==4 :
+ student['t']=float(line[1])
+ if i==5 :
+ student['df']=float(line[1])
+ if i==6:
+ student['graph']=line[1]
+ if i==7:
+ listr.append(student)
+ student={}
+ i+=1
+ txt2=''
+ ancre=0
+ LISTFILE=[]
+ LISTFILE.append(False)
+ txt=MakeHeader('T de Student', self.encode)
+ ListGraph=[]
+ for i in select1 :
+ for j in select2:
+ ancre+=1
+ Student=listr[ancre-1]
+ pvalue=Student['p.value']
+ Colname=self.LabelListNum[j]
+ Colgrp=self.LabelListGrp[i]
+ LISTFILE.append(Student['graph'])
+ if pvalue<0.05:
+ color='green'
+ else:
+ color='red'
+ txt+="<a href=#%s><font color=%s>%s</font></a><br />"%(ancre,color,Colname+' / '+Colgrp)
+ txt2+=MakeStudentTable(Student,self.num,ancre,Graph,os.path.basename(Student['graph']),Colname,self.encode)
+ txt+=txt2
+ fileout=os.path.join(self.TEMPDIR,'resultats-student_%s.html'%str(self.num))
+ File=open(fileout,'w')
+ File.write(txt)
+ File.close()
+ LISTFILE.append(fileout)
+# dlg.Destroy()
+ return LISTFILE
+
+
+class MakeStudent():
+
+ def __init__(self,parent):
+ dlg = StudentDialog(parent, -1, "Student", size=(350, 400),
+ style = wx.DEFAULT_DIALOG_STYLE
+ )
+ dlg.CenterOnScreen()
+ val = dlg.ShowModal()
+ if val==wx.ID_OK :
+ ColSel1=dlg.list_box_1.GetSelections()
+ ColSel2=dlg.list_box_2.GetSelections()
+ listfileout=dlg.ShowStudent(ColSel1,ColSel2)
+ parent.FreqNum+=1
+ parent.DictTab["t de student_%s*"%parent.FreqNum]=listfileout
+ parent.FileTabList.append(listfileout)
+ parent.newtab=wx.html.HtmlWindow(parent.nb, -1)
+ if "gtk2" in wx.PlatformInfo:
+ parent.newtab.SetStandardFonts()
+ parent.newtab.LoadPage(listfileout[len(listfileout)-1])
+ parent.nb.AddPage(parent.newtab,"t de student_%s*"%parent.FreqNum)
+ parent.nb.SetSelection(parent.nb.GetPageCount()-1)
+ parent.ShowTab(wx.EVT_BUTTON)
+ parent.DisEnSaveTabAs(True)
projects / iramuteq / blobdiff